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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
78
histone
78
histone modification
41
narrow histone mark
37
broad histone mark
24
control
3
nucleotide modification
2
transcription factor
1
RNA binding protein
Date released
16
August, 2017
15
September, 2018
4
November, 2019
3
October, 2019
2
May, 2021
1
March, 2020
Available data
41
bam
41
bigWig
33
bed narrowPeak
31
fastq
3
bigBed narrowPeak
1
tagAlign
Organism
41
Homo sapiens
Biosample type
tissue
31
primary cell
9
cell line
1
in vitro differentiated cells
Organ
49
epithelium
41
pancreas
20
connective tissue
16
liver
8
embryo
8
vasculature
7
blood vessel
6
vein
5
kidney
4
musculature of body
3
brain
2
heart
1
blood
1
bodily fluid
1
eye
Project
39
AMP
2
T1D
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
41
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
23
missing controlled_by
Audit category:
4
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
cell line
EndoC_BH1
6
Panc1
3
in vitro differentiated cells
pancreatic PP cell
1
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