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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
Assay category
123
DNA binding
Target of assay
202
histone
202
histone modification
123
narrow histone mark
79
broad histone mark
33
control
3
RNA binding protein
3
transcription factor
Date released
80
October, 2019
31
November, 2017
10
May, 2019
2
October, 2017
Available data
111
bam
111
bed narrowPeak
111
bigWig
54
tagAlign
38
bigBed narrowPeak
8
bed broadPeak
4
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
123
Homo sapiens
Biosample type
114
tissue
9
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
123
AMP
Genome assembly (visualization)
112
GRCh38
97
hg19
Lab
123
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
tissue
layer of hippocampus
8
angular gyrus
7
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
+ See 63 more…
primary cell
endothelial cell of umbilical vein
6
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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