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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
309
transcription factor
88
recombinant protein
58
RNA binding protein
32
histone
32
histone modification
28
chromatin remodeller
16
broad histone mark
16
narrow histone mark
2
other context
2
other post-translational modification
Date released
30
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
November, 2019
Available data
60
bam
60
bed narrowPeak
60
bigWig
59
bigBed narrowPeak
59
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
60
Homo sapiens
Biosample type
60
cell line
25
tissue
9
primary cell
6
in vitro differentiated cells
Organ
49
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
60
AMP
Genome assembly (visualization)
64
hg19
60
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
cell line
HepG2
49
GM12878
10
EndoC_BH1
1
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