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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
560
histone modification
559
histone
296
narrow histone mark
263
broad histone mark
163
control
72
transcription factor
18
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
6
October, 2018
4
April, 2019
4
May, 2019
3
November, 2018
2
August, 2017
2
December, 2017
Available data
21
bam
20
bigWig
19
bed narrowPeak
18
bigBed narrowPeak
13
fastq
2
bed bed3+
Organism
21
Homo sapiens
Biosample type
67
cell line
21
tissue
9
primary cell
7
in vitro differentiated cells
Organ
8
pancreas
5
adipose tissue
connective tissue
5
heart
3
blood vessel
3
spleen
3
vasculature
2
liver
1
artery
1
kidney
Project
21
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
tissue
body of pancreas
5
heart left ventricle
3
spleen
3
islet of Langerhans
2
ascending aorta
1
coronary artery
1
kidney
1
liver
1
pancreas
1
right atrium auricular region
1
right lobe of liver
1
thoracic aorta
1
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