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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
420
transcription factor
389
histone
389
histone modification
198
broad histone mark
190
narrow histone mark
156
control
89
recombinant protein
86
RNA binding protein
34
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
68
November, 2017
16
November, 2018
7
October, 2019
Available data
91
bam
90
bed narrowPeak
90
bigWig
84
fastq
83
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
91
Homo sapiens
Biosample type
91
cell line
tissue
Organ
84
liver
7
kidney
Project
91
AMP
Genome assembly (visualization)
90
GRCh38
87
hg19
Lab
91
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
cell line
HepG2
84
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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