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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
310
ChIP-seq
Assay category
310
DNA binding
Target of assay
591
histone modification
590
histone
307
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
3
November, 2018
2
December, 2017
2
January, 2019
2
October, 2017
Available data
254
bigWig
252
bed narrowPeak
244
bam
111
bigBed narrowPeak
110
tagAlign
31
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
308
Homo sapiens
Biosample type
310
tissue
75
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
30
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
5
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
310
AMP
2
T1D
Genome assembly (visualization)
240
hg19
237
GRCh38
Lab
310
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
310 results
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ChIP-seq
tissue
liver
42
islet of Langerhans
35
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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