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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
865
histone modification
864
histone
439
narrow histone mark
425
broad histone mark
222
control
104
transcription factor
38
RNA binding protein
3
chromatin remodeller
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
11
October, 2018
5
May, 2019
5
May, 2024
4
April, 2019
4
August, 2017
4
June, 2019
3
November, 2017
3
November, 2018
2
December, 2017
Available data
40
bigWig
39
bed narrowPeak
36
bam
33
bigBed narrowPeak
23
fastq
5
bed broadPeak
5
bigBed broadPeak
2
bed bed3+
Organism
41
Homo sapiens
Biosample type
67
cell line
31
tissue
11
in vitro differentiated cells
10
primary cell
Organ
11
heart
8
pancreas
6
connective tissue
5
adipose tissue
5
epithelium
5
vasculature
4
blood vessel
3
brain
3
kidney
3
spleen
2
liver
1
artery
1
eye
Project
41
AMP
Genome assembly (visualization)
39
GRCh38
35
hg19
Lab
36
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
Audit category:
1
missing controlled_by
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
spleen
3
+ See 10 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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