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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
267
ChIP-seq
Assay category
267
DNA binding
Target of assay
563
histone modification
562
histone
298
narrow histone mark
264
broad histone mark
158
control
74
transcription factor
12
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
3
November, 2018
Available data
217
bed narrowPeak
217
bigWig
206
bam
188
bigBed narrowPeak
76
tagAlign
37
fastq
20
bed broadPeak
6
bed bed3+
Organism
263
Homo sapiens
Biosample type
267
tissue
122
primary cell
56
in vitro differentiated cells
21
cell line
1
stem cell
Organ
70
brain
37
heart
36
blood vessel
36
vasculature
34
limb
25
liver
22
pancreas
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
7
spleen
Project
267
AMP
Genome assembly (visualization)
206
GRCh38
182
hg19
Lab
267
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2018
BIOSAMPLE
ASSAY
267 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
islet of Langerhans
14
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