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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
593
ChIP-seq
Assay category
593
DNA binding
Target of assay
591
histone modification
590
histone
307
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
166
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
3
November, 2018
2
March, 2020
Available data
489
bigWig
487
bed narrowPeak
468
bam
315
bigBed narrowPeak
186
tagAlign
76
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
587
Homo sapiens
Biosample type
593
tissue
236
primary cell
112
in vitro differentiated cells
40
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
60
heart
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
9
spleen
4
gonad
4
ovary
eye
1
lymph node
1
pituitary gland
Project
591
AMP
2
T1D
Genome assembly (visualization)
461
GRCh38
440
hg19
Lab
593
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
eye
BIOSAMPLE
ASSAY
593 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
49
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
tibial nerve
24
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