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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
79
transcription factor
74
histone modification
73
histone
67
control
45
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
40
August, 2017
16
October, 2018
7
October, 2017
6
January, 2019
5
December, 2017
3
November, 2018
Available data
490
bigWig
488
bed narrowPeak
469
bam
315
bigBed narrowPeak
186
tagAlign
77
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
71
Homo sapiens
Biosample type
77
tissue
73
primary cell
65
in vitro differentiated cells
18
cell line
2
stem cell
Organ
42
pancreas
18
liver
9
spleen
7
brain
1
adipose tissue
1
connective tissue
Project
77
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
77
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
tissue
body of pancreas
16
islet of Langerhans
14
liver
13
pancreas
12
spleen
9
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