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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
61
DNA binding
Target of assay
64
transcription factor
58
histone modification
57
histone
40
control
34
broad histone mark
23
narrow histone mark
4
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
40
August, 2017
October, 2018
7
October, 2017
6
January, 2019
5
December, 2017
3
November, 2018
Available data
495
bigWig
493
bed narrowPeak
439
bam
285
bigBed narrowPeak
186
tagAlign
61
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
55
Homo sapiens
Biosample type
73
primary cell
65
in vitro differentiated cells
61
tissue
18
cell line
2
stem cell
Organ
26
pancreas
18
liver
9
spleen
7
brain
1
adipose tissue
1
connective tissue
Project
61
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
61
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2018
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
tissue
islet of Langerhans
14
liver
13
pancreas
12
spleen
9
brain
7
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