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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
Assay category
76
DNA binding
Target of assay
73
histone modification
72
histone
62
transcription factor
48
control
45
broad histone mark
27
narrow histone mark
10
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
39
August, 2017
16
October, 2018
7
October, 2017
6
January, 2019
5
December, 2017
3
November, 2018
Available data
523
bigWig
521
bed narrowPeak
468
bam
314
bigBed narrowPeak
179
tagAlign
76
fastq
34
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
70
Homo sapiens
Biosample type
76
tissue
73
primary cell
40
in vitro differentiated cells
18
cell line
2
stem cell
Organ
42
pancreas
18
liver
9
spleen
7
brain
1
adipose tissue
connective tissue
Project
76
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
76
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
76 results
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ChIP-seq
tissue
body of pancreas
16
islet of Langerhans
14
liver
13
pancreas
12
spleen
9
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