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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
79
transcription factor
74
histone modification
73
histone
67
control
45
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
40
August, 2017
16
October, 2018
7
December, 2017
7
October, 2017
6
January, 2019
3
November, 2018
Available data
527
bigWig
525
bed narrowPeak
471
bam
317
bigBed narrowPeak
186
tagAlign
79
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
73
Homo sapiens
Biosample type
79
tissue
74
primary cell
68
in vitro differentiated cells
48
cell line
2
stem cell
Organ
42
pancreas
20
liver
9
spleen
7
brain
1
adipose tissue
1
connective tissue
Project
79
AMP
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
79
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
tissue
body of pancreas
16
liver
15
islet of Langerhans
14
pancreas
12
spleen
9
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