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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
304
ChIP-seq
Assay category
304
DNA binding
Target of assay
568
histone modification
567
histone
301
narrow histone mark
266
broad histone mark
173
control
88
transcription factor
24
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
April, 2019
15
May, 2024
11
October, 2018
3
November, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
248
bigWig
246
bed narrowPeak
224
bam
110
tagAlign
89
bigBed narrowPeak
31
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
302
Homo sapiens
Biosample type
304
tissue
115
primary cell
55
in vitro differentiated cells
21
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
9
musculature of body
8
nerve
6
artery
5
spleen
4
gonad
4
ovary
2
eye
2
kidney
1
lymph node
1
pituitary gland
Project
302
AMP
2
T1D
Genome assembly (visualization)
232
GRCh38
219
hg19
Lab
289
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
April, 2019
BIOSAMPLE
ASSAY
304 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
layer of hippocampus
8
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