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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
325
ChIP-seq
Assay category
325
DNA binding
Target of assay
623
histone modification
622
histone
322
narrow histone mark
300
broad histone mark
175
control
63
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
3
November, 2018
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
269
bigWig
267
bed narrowPeak
244
bam
110
tagAlign
109
bigBed narrowPeak
29
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
323
Homo sapiens
Biosample type
325
tissue
115
primary cell
42
in vitro differentiated cells
21
cell line
Organ
114
brain
42
liver
38
heart
32
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
5
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
323
AMP
2
T1D
Genome assembly (visualization)
252
GRCh38
240
hg19
Lab
310
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
December, 2017
BIOSAMPLE
ASSAY
325 results
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ChIP-seq
tissue
liver
42
islet of Langerhans
37
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
kidney
10
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