Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
389
transcription factor
114
control
104
histone modification
103
histone
82
recombinant protein
68
RNA binding protein
61
narrow histone mark
42
broad histone mark
33
chromatin remodeller
2
other context
2
other post-translational modification
Date released
36
November, 2017
21
November, 2018
6
January, 2019
4
December, 2017
2
December, 2018
1
August, 2021
Available data
69
bam
69
fastq
68
bed narrowPeak
68
bigWig
67
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
70
Homo sapiens
Biosample type
66
cell line
2
in vitro differentiated cells
2
tissue
Organ
60
liver
11
heart
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
3
spleen
1
artery
1
eye
Project
70
AMP
Genome assembly (visualization)
67
hg19
63
GRCh38
Lab
69
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
70 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
56
GM12878
10
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
Download