Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
Assay category
95
DNA binding
Target of assay
554
histone modification
553
histone
477
transcription factor
299
narrow histone mark
253
broad histone mark
90
RNA binding protein
85
recombinant protein
35
chromatin remodeller
22
control
5
other context
5
other post-translational modification
Date released
33
November, 2017
24
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
4
December, 2017
4
May, 2019
3
April, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
95
bigWig
94
bam
94
bed narrowPeak
87
bigBed narrowPeak
86
fastq
5
bed broadPeak
5
bigBed broadPeak
2
bed bed3+
1
tar
Organism
95
Homo sapiens
Biosample type
64
cell line
25
tissue
primary cell
6
in vitro differentiated cells
Organ
57
liver
10
blood
10
bodily fluid
9
connective tissue
9
pancreas
5
adipose tissue
5
heart
3
blood vessel
3
epithelium
3
spleen
3
vasculature
1
artery
Project
95
AMP
Genome assembly (visualization)
95
hg19
91
GRCh38
Lab
94
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
biosample_type!
primary cell
BIOSAMPLE
ASSAY
95 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
53
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
heart left ventricle
3
omental fat pad
3
spleen
3
islet of Langerhans
2
+ See 8 more…
in vitro differentiated cells
adipocyte
4
hepatocyte
2
See all biosamples
Download