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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
45
November, 2017
26
November, 2018
8
January, 2019
4
December, 2018
1
August, 2021
1
November, 2019
Available data
84
bam
83
bed narrowPeak
83
bigWig
83
fastq
81
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
tar
Organism
85
Homo sapiens
Biosample type
85
cell line
28
tissue
13
in vitro differentiated cells
10
primary cell
Organ
69
liver
15
blood
15
bodily fluid
1
epithelium
1
pancreas
Project
85
AMP
Genome assembly (visualization)
82
hg19
77
GRCh38
Lab
84
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent control
1
inconsistent ontology term
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
cell line
HepG2
69
GM12878
15
EndoC_BH1
1
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