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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
339
histone
339
histone modification
173
broad histone mark
165
narrow histone mark
69
control
57
transcription factor
19
RNA binding protein
4
chromatin remodeller
0
other post-translational modification
Date released
6
August, 2017
5
May, 2021
3
June, 2019
3
November, 2017
2
December, 2017
Available data
14
bam
14
bed narrowPeak
14
bigWig
11
fastq
10
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
67
cell line
30
tissue
11
in vitro differentiated cells
8
primary cell
Organ
7
epithelium
5
connective tissue
3
brain
kidney
2
liver
2
vasculature
1
blood vessel
1
eye
1
heart
Project
19
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
14
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
hepatocyte
2
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
retinal pigment epithelial cell
1
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