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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
106
transcription factor
25
RNA binding protein
22
control
21
histone
21
histone modification
16
recombinant protein
11
narrow histone mark
10
broad histone mark
10
chromatin remodeller
3
other context
3
other post-translational modification
Date released
39
November, 2017
24
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
5
May, 2024
4
April, 2019
4
December, 2017
4
June, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
28
fastq
Organism
28
Homo sapiens
Biosample type
21
cell line
5
tissue
2
in vitro differentiated cells
Organ
23
liver
3
spleen
2
blood
2
bodily fluid
2
epithelium
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent control read length
1
inconsistent control run_type
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
cell line
HepG2
19
GM12878
2
tissue
spleen
3
liver
1
right lobe of liver
1
in vitro differentiated cells
hepatocyte
2
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