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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
ChIP-seq
Assay category
206
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
0
other post-translational modification
Date released
206
August, 2017
196
October, 2019
145
May, 2021
127
November, 2017
97
May, 2019
64
April, 2019
41
October, 2018
35
December, 2017
32
September, 2018
27
May, 2020
24
November, 2018
23
June, 2019
21
August, 2021
16
February, 2018
13
January, 2019
12
October, 2017
11
November, 2019
3
March, 2020
2
December, 2018
Available data
130
bigWig
114
bed narrowPeak
110
bam
110
fastq
74
tagAlign
39
bed broadPeak
32
bigBed narrowPeak
14
bed bed3+
13
bigBed broadPeak
Organism
200
Homo sapiens
Biosample type
125
tissue
41
in vitro differentiated cells
40
primary cell
Organ
73
connective tissue
68
pancreas
32
adipose tissue
32
liver
19
musculature of body
14
epithelium
Project
206
AMP
Genome assembly (visualization)
130
hg19
109
GRCh38
Lab
206
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
206 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
30
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
in vitro differentiated cells
adipocyte
41
primary cell
skeletal muscle myoblast
14
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
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