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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
Assay category
110
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
110
November, 2017
58
August, 2017
40
October, 2018
39
October, 2019
30
November, 2018
28
May, 2019
25
December, 2017
23
May, 2020
18
April, 2019
14
May, 2021
13
August, 2021
12
June, 2019
10
January, 2019
8
February, 2018
6
December, 2018
6
September, 2017
5
May, 2024
5
November, 2020
3
February, 2021
3
July, 2019
3
November, 2019
3
October, 2017
Available data
110
bam
98
fastq
53
bigWig
37
bed narrowPeak
37
bigBed narrowPeak
11
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
tar
Organism
110
Homo sapiens
Biosample type
92
cell line
12
tissue
6
primary cell
Organ
92
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
110
AMP
Genome assembly (visualization)
52
hg19
33
GRCh38
Lab
110
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
110 results
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ChIP-seq
cell line
HepG2
92
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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