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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
394
transcription factor
316
histone
316
histone modification
197
broad histone mark
119
narrow histone mark
82
RNA binding protein
81
recombinant protein
34
chromatin remodeller
5
other context
5
other post-translational modification
Date released
35
November, 2017
24
November, 2018
6
January, 2019
6
October, 2018
4
December, 2017
3
April, 2019
3
June, 2019
2
August, 2017
2
December, 2018
2
May, 2019
Available data
96
bigWig
95
bed narrowPeak
93
bam
87
bigBed narrowPeak
83
fastq
8
bed broadPeak
8
bigBed broadPeak
2
bed bed3+
1
tar
Organism
87
Homo sapiens
Biosample type
63
cell line
15
tissue
7
primary cell
2
in vitro differentiated cells
Organ
57
liver
10
blood
10
bodily fluid
7
epithelium
connective tissue
6
heart
6
pancreas
5
adipose tissue
vasculature
4
blood vessel
3
brain
3
spleen
2
kidney
1
artery
1
eye
Project
87
AMP
Genome assembly (visualization)
86
hg19
82
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
organ_slims!
connective tissue
vasculature
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
cell line
HepG2
53
GM12878
10
tissue
body of pancreas
5
heart left ventricle
3
spleen
3
liver
1
pancreas
1
+ See 2 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
2
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