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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
30
November, 2017
19
November, 2018
2
December, 2018
2
January, 2019
1
August, 2021
1
November, 2019
Available data
54
bam
53
bed narrowPeak
53
bigWig
53
fastq
51
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
55
Homo sapiens
Biosample type
55
cell line
26
tissue
8
primary cell
6
in vitro differentiated cells
Organ
49
liver
5
blood
5
bodily fluid
1
epithelium
1
pancreas
Project
55
AMP
Genome assembly (visualization)
52
hg19
49
GRCh38
Lab
54
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
connective tissue
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
cell line
HepG2
49
GM12878
5
EndoC_BH1
1
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