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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
229
histone
229
histone modification
118
broad histone mark
narrow histone mark
32
control
9
RNA binding protein
9
transcription factor
1
chromatin remodeller
0
other post-translational modification
Date released
3
June, 2019
3
November, 2017
2
August, 2017
1
May, 2019
Available data
9
bam
9
bed narrowPeak
9
bigBed narrowPeak
9
bigWig
5
bed broadPeak
5
bigBed broadPeak
5
fastq
Organism
9
Homo sapiens
Biosample type
67
cell line
21
tissue
9
primary cell
7
in vitro differentiated cells
Organ
5
epithelium
3
brain
2
kidney
2
vasculature
1
blood vessel
connective tissue
1
eye
1
heart
Project
9
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
connective tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
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