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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
MeRIP-seq
Assay category
11
DNA binding
Target of assay
188
histone
188
histone modification
95
broad histone mark
93
narrow histone mark
30
control
29
transcription factor
11
RNA binding protein
5
nucleotide modification
0
other post-translational modification
Date released
5
May, 2021
5
May, 2024
5
November, 2020
1
August, 2021
Available data
101
bigWig
100
bed narrowPeak
bam
92
bigBed narrowPeak
85
fastq
10
bed broadPeak
10
bigBed broadPeak
2
bed bed3+
1
tar
Organism
16
Homo sapiens
Biosample type
7
tissue
5
in vitro differentiated cells
4
cell line
Organ
5
heart
5
pancreas
3
epithelium
1
liver
Project
16
AMP
Genome assembly (visualization)
5
GRCh38
1
hg19
Lab
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
5
Rohit N. Kulkarni, M.D., Ph.D.
1
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
organ_slims!
connective tissue
files.file_type!
bam
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
left cardiac atrium
5
islet of Langerhans
2
in vitro differentiated cells
embryonic stem cell
5
cell line
EndoC_BH1
3
HepG2
1
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