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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
Assay category
53
DNA binding
Target of assay
286
transcription factor
81
recombinant protein
70
histone modification
69
histone
51
RNA binding protein
41
narrow histone mark
28
broad histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
1
control
Date released
30
November, 2017
19
November, 2018
4
December, 2017
Available data
53
bam
53
bed narrowPeak
53
bigBed narrowPeak
53
bigWig
53
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
53
Homo sapiens
Biosample type
49
cell line
2
in vitro differentiated cells
2
tissue
Organ
53
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
spleen
2
kidney
1
artery
1
eye
Project
53
AMP
Genome assembly (visualization)
57
hg19
53
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
cell line
HepG2
49
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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