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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
45
November, 2017
23
November, 2018
6
December, 2017
1
August, 2021
Available data
74
bam
74
fastq
73
bed narrowPeak
73
bigWig
72
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
tar
Organism
75
Homo sapiens
Biosample type
69
cell line
4
tissue
2
in vitro differentiated cells
Organ
75
liver
15
blood
15
bodily fluid
12
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
3
spleen
1
artery
1
eye
Project
75
AMP
Genome assembly (visualization)
72
hg19
67
GRCh38
Lab
74
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
cell line
HepG2
69
tissue
liver
3
right lobe of liver
1
in vitro differentiated cells
hepatocyte
2
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