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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
5
MeRIP-seq
Assay category
23
DNA binding
Target of assay
172
histone
172
histone modification
95
broad histone mark
77
narrow histone mark
28
transcription factor
17
control
11
RNA binding protein
5
nucleotide modification
0
other post-translational modification
Date released
13
May, 2021
5
August, 2021
5
May, 2024
5
November, 2020
Available data
9
bigWig
6
bed narrowPeak
Organism
28
Homo sapiens
Biosample type
10
in vitro differentiated cells
8
cell line
7
tissue
3
primary cell
Organ
5
heart
5
liver
5
pancreas
3
epithelium
Project
28
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
AMP-T2D consortium
13
Kyle Gaulton, UCSD
5
Bing Ren, UCSD
5
Patrick T. Ellinor, Broad
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
month_released!
October, 2018
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
MeRIP-seq
in vitro differentiated cells
embryonic stem cell
10
cell line
HepG2
5
EndoC_BH1
3
tissue
left cardiac atrium
5
islet of Langerhans
2
primary cell
CD8-positive, alpha-beta T cell
3
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