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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
21
November, 2017
17
August, 2017
1
October, 2017
Available data
531
bigWig
519
bed narrowPeak
513
bam
247
bigBed narrowPeak
204
fastq
174
tagAlign
39
bed broadPeak
24
bigBed broadPeak
15
bed bed3+
1
tagAlign bed3+
1
tar
Organism
37
Homo sapiens
Biosample type
15
tissue
13
primary cell
11
cell line
Organ
11
brain
11
liver
5
musculature of body
4
epithelium
4
pancreas
4
vasculature
2
blood vessel
1
adipose tissue
1
connective tissue
Project
39
AMP
Genome assembly (visualization)
39
hg19
27
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
brain
1
caudate nucleus
1
+ See 4 more…
primary cell
skeletal muscle myoblast
7
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cell line
HepG2
11
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