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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
Assay category
57
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
0
other post-translational modification
Date released
11
September, 2018
9
December, 2017
9
October, 2019
8
August, 2017
5
November, 2019
4
June, 2019
4
November, 2017
2
August, 2021
2
May, 2019
2
May, 2021
1
March, 2020
Available data
57
bam
56
bed narrowPeak
56
bigWig
32
fastq
22
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bed3+
Organism
57
Homo sapiens
Biosample type
40
primary cell
10
in vitro differentiated cells
7
cell line
Organ
120
brain
120
liver
82
pancreas
57
epithelium
43
connective tissue
31
heart
31
vasculature
29
blood vessel
18
kidney
17
adipose tissue
15
limb
13
musculature of body
11
blood
11
bodily fluid
8
embryo
8
nerve
7
artery
6
vein
5
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
55
AMP
2
T1D
Genome assembly (visualization)
56
GRCh38
56
hg19
Lab
57
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
5
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
in vitro differentiated cells
hepatocyte
7
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
7
See all biosamples
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