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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
ChIP-seq
Assay category
124
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
74
November, 2017
19
August, 2017
16
November, 2018
10
December, 2017
3
October, 2019
2
August, 2021
Available data
111
bam
111
bigWig
110
bed narrowPeak
107
fastq
102
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
124
Homo sapiens
Biosample type
91
cell line
25
tissue
7
in vitro differentiated cells
1
primary cell
Organ
124
liver
78
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
37
heart
34
limb
22
kidney
20
adipose tissue
20
musculature of body
16
nerve
14
artery
9
vein
4
embryo
4
spleen
Project
124
AMP
Genome assembly (visualization)
109
GRCh38
108
hg19
Lab
123
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
124 results
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ChIP-seq
cell line
HepG2
91
tissue
liver
22
right lobe of liver
3
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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