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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
140
ChIP-seq
Assay category
140
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
100
November, 2017
35
November, 2018
4
December, 2017
1
August, 2021
Available data
139
bam
139
fastq
137
bed narrowPeak
137
bigWig
136
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
140
Homo sapiens
Biosample type
136
cell line
2
in vitro differentiated cells
2
tissue
Organ
140
liver
10
blood
10
bodily fluid
10
connective tissue
10
kidney
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
1
artery
1
eye
Project
140
AMP
Genome assembly (visualization)
133
hg19
132
GRCh38
Lab
139
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
3
missing controlled_by
Audit category:
7
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
140 results
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ChIP-seq
cell line
HepG2
136
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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