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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
Assay category
122
DNA binding
Target of assay
769
histone modification
768
histone
443
transcription factor
395
narrow histone mark
372
broad histone mark
95
RNA binding protein
88
recombinant protein
34
chromatin remodeller
12
control
5
other context
5
other post-translational modification
Date released
79
November, 2017
22
November, 2018
7
October, 2019
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
122
bam
122
bed narrowPeak
122
bigWig
115
fastq
113
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
122
Homo sapiens
Biosample type
116
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
102
liver
10
blood
10
bodily fluid
7
kidney
2
connective tissue
1
epithelium
Project
122
AMP
Genome assembly (visualization)
122
GRCh38
121
hg19
Lab
122
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
13
inconsistent control read length
6
inconsistent control run_type
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
cell line
HepG2
99
GM12878
10
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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