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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
784
histone modification
783
histone
487
transcription factor
411
narrow histone mark
371
broad histone mark
100
RNA binding protein
85
recombinant protein
36
chromatin remodeller
32
control
5
other context
5
other post-translational modification
Date released
80
November, 2017
20
November, 2018
7
October, 2019
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
121
bam
121
bed narrowPeak
121
bigWig
114
fastq
112
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
121
Homo sapiens
Biosample type
115
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
101
liver
10
blood
10
bodily fluid
7
kidney
2
connective tissue
1
epithelium
Project
121
AMP
Genome assembly (visualization)
122
GRCh38
121
hg19
Lab
121
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
14
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
cell line
HepG2
98
GM12878
10
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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