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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
Assay category
118
DNA binding
Target of assay
454
transcription factor
230
histone modification
229
histone
168
control
118
broad histone mark
110
narrow histone mark
89
RNA binding protein
82
recombinant protein
36
chromatin remodeller
5
other context
5
other post-translational modification
Date released
81
November, 2017
23
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
125
bam
124
bed narrowPeak
124
bigWig
118
fastq
115
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
118
Homo sapiens
Biosample type
112
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
105
liver
10
blood
10
bodily fluid
2
connective tissue
1
epithelium
Project
118
AMP
Genome assembly (visualization)
115
GRCh38
114
hg19
Lab
118
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
7
missing controlled_by
Audit category:
14
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
cell line
HepG2
102
GM12878
10
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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