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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
412
transcription factor
226
histone modification
225
histone
116
broad histone mark
108
narrow histone mark
82
RNA binding protein
81
recombinant protein
34
chromatin remodeller
9
control
5
other context
5
other post-translational modification
Date released
79
November, 2017
22
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
122
bam
122
bed narrowPeak
122
bigWig
115
fastq
113
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
115
Homo sapiens
Biosample type
109
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
102
liver
10
blood
10
bodily fluid
2
connective tissue
1
epithelium
Project
115
AMP
Genome assembly (visualization)
115
GRCh38
114
hg19
Lab
115
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
13
inconsistent control read length
6
inconsistent control run_type
BIOSAMPLE
ASSAY
115 results
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ChIP-seq
cell line
HepG2
99
GM12878
10
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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