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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
86
histone
86
histone modification
45
transcription factor
43
narrow histone mark
42
broad histone mark
27
control
11
RNA binding protein
3
chromatin remodeller
Date released
22
August, 2017
12
May, 2021
11
December, 2017
Available data
37
bam
37
bigWig
33
fastq
32
bed narrowPeak
6
bed bed3+
tagAlign
2
bigBed narrowPeak
Organism
45
Homo sapiens
Biosample type
356
cell line
89
tissue
45
in vitro differentiated cells
10
primary cell
Organ
22
connective tissue
3
embryo
2
epithelium
2
liver
Project
45
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
33
AMP-T2D consortium
12
Kyle Gaulton, UCSD
Audit category:
5
missing controlled_by
Audit category:
10
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
embryonic stem cell
12
pancreatic endoderm
3
Posterior foregut
2
definitive endodermal cell
2
hepatocyte
2
primitive gut cell
2
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