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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
70
histone
70
histone modification
40
broad histone mark
39
transcription factor
33
control
29
narrow histone mark
9
RNA binding protein
2
chromatin remodeller
Date released
34
August, 2017
5
October, 2018
Available data
39
bam
39
bigWig
39
fastq
22
bed narrowPeak
10
bed bed3+
5
bigBed narrowPeak
Organism
39
Homo sapiens
Biosample type
22
in vitro differentiated cells
17
tissue
Organ
338
liver
51
blood
51
bodily fluid
39
connective tissue
18
pancreas
17
adipose tissue
11
heart
9
vasculature
8
blood vessel
6
epithelium
6
spleen
5
artery
3
brain
3
embryo
1
eye
1
kidney
Project
39
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
39
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
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