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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
249
ChIP-seq
Assay category
249
DNA binding
Target of assay
249
transcription factor
180
histone
180
histone modification
108
broad histone mark
94
control
72
narrow histone mark
66
recombinant protein
42
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
248
bam
245
bigWig
244
fastq
241
bed narrowPeak
241
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
249
Homo sapiens
Biosample type
241
cell line
4
primary cell
4
tissue
Organ
241
liver
5
vasculature
4
blood vessel
3
brain
3
epithelium
2
heart
1
artery
1
kidney
Project
249
AMP
Genome assembly (visualization)
243
hg19
209
GRCh38
Lab
249
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
249 results
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ChIP-seq
cell line
HepG2
241
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney epithelial cell
1
tissue
ascending aorta
1
coronary artery
1
right atrium auricular region
1
thoracic aorta
1
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