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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
250
ChIP-seq
Assay category
250
DNA binding
Target of assay
250
transcription factor
148
histone
148
histone modification
87
broad histone mark
85
control
66
recombinant protein
61
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
249
bam
245
bigWig
244
fastq
241
bed narrowPeak
241
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
250
Homo sapiens
Biosample type
241
cell line
6
tissue
3
primary cell
Organ
241
liver
5
heart
3
brain
2
epithelium
2
vasculature
1
blood vessel
1
kidney
Project
250
AMP
Genome assembly (visualization)
243
hg19
209
GRCh38
Lab
250
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
250 results
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ChIP-seq
cell line
HepG2
241
tissue
heart left ventricle
5
kidney
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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