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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
258
ChIP-seq
Assay category
258
DNA binding
Target of assay
258
transcription factor
95
histone
95
histone modification
75
control
66
recombinant protein
54
broad histone mark
43
RNA binding protein
41
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
258
fastq
257
bam
254
bigWig
250
bed narrowPeak
250
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
258
Homo sapiens
Biosample type
255
cell line
3
primary cell
Organ
241
liver
14
blood
14
bodily fluid
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
258
AMP
Genome assembly (visualization)
252
hg19
218
GRCh38
Lab
258
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
258 results
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ChIP-seq
cell line
HepG2
241
GM12878
14
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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