Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
389
ChIP-seq
Assay category
389
DNA binding
Target of assay
389
transcription factor
114
control
104
histone modification
103
histone
82
recombinant protein
68
RNA binding protein
61
narrow histone mark
42
broad histone mark
33
chromatin remodeller
2
other context
2
other post-translational modification
Date released
241
November, 2017
61
November, 2018
33
December, 2017
25
December, 2018
14
January, 2019
11
August, 2021
4
August, 2017
Available data
384
bigWig
380
bed narrowPeak
378
fastq
377
bam
365
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
389
Homo sapiens
Biosample type
348
cell line
39
tissue
2
in vitro differentiated cells
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
12
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
389
AMP
Genome assembly (visualization)
380
hg19
337
GRCh38
Lab
378
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
28
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
389 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
297
GM12878
51
tissue
liver
37
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
Download