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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
Assay category
48
DNA binding
Target of assay
148
histone
148
histone modification
89
broad histone mark
58
narrow histone mark
56
control
48
transcription factor
14
RNA binding protein
2
chromatin remodeller
Date released
34
August, 2017
5
October, 2018
4
February, 2021
3
May, 2019
1
June, 2019
1
November, 2017
Available data
48
bam
48
bigWig
40
fastq
31
bed narrowPeak
10
bed bed3+
10
bigBed narrowPeak
4
tagAlign
1
bed broadPeak
1
bigBed broadPeak
Organism
48
Homo sapiens
Biosample type
22
in vitro differentiated cells
20
tissue
4
cell line
2
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
12
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
48
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
48
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
ascending aorta
1
coronary artery
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
4
primary cell
brain microvascular endothelial cell
1
cardiac fibroblast
1
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