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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
Assay category
7
DNA binding
Target of assay
79
histone
79
histone modification
42
narrow histone mark
broad histone mark
27
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
Date released
December, 2017
2
June, 2019
2
November, 2017
1
May, 2019
1
May, 2021
1
November, 2019
Available data
7
bam
7
bed narrowPeak
7
bigWig
5
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
2
fastq
1
tagAlign
Organism
7
Homo sapiens
Biosample type
5
primary cell
1
cell line
1
in vitro differentiated cells
Organ
305
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
vasculature
8
blood vessel
7
epithelium
6
spleen
5
artery
3
brain
1
eye
Project
7
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
7
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
December, 2017
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
cell line
EndoC_BH1
1
in vitro differentiated cells
pancreatic PP cell
1
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