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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
244
ChIP-seq
Assay category
244
DNA binding
Target of assay
244
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
244
November, 2017
57
November, 2018
25
December, 2018
24
August, 2017
16
May, 2021
14
January, 2019
11
August, 2021
11
December, 2017
7
October, 2019
5
February, 2021
4
June, 2019
1
May, 2019
1
November, 2019
Available data
244
fastq
243
bam
240
bigWig
236
bed narrowPeak
236
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
244
Homo sapiens
Biosample type
241
cell line
3
primary cell
Organ
241
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
244
AMP
Genome assembly (visualization)
238
hg19
204
GRCh38
Lab
244
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
biosample_type!
tissue
BIOSAMPLE
ASSAY
244 results
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Clear Filters
ChIP-seq
cell line
HepG2
241
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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