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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
395
histone modification
394
histone
229
narrow histone mark
164
broad histone mark
89
control
54
transcription factor
8
RNA binding protein
7
recombinant protein
3
chromatin remodeller
Date released
247
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
30
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
54
bam
54
bigWig
47
fastq
31
bed narrowPeak
19
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
23
tissue
22
in vitro differentiated cells
7
cell line
2
primary cell
Organ
34
connective tissue
12
adipose tissue
7
kidney
7
pancreas
4
liver
Project
54
AMP
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
liver
4
in vitro differentiated cells
adipocyte
22
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
primary cell
skeletal muscle myoblast
2
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