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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
Assay category
53
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
12
October, 2019
10
September, 2018
9
December, 2017
7
November, 2019
6
August, 2017
3
May, 2019
2
June, 2019
2
November, 2017
1
August, 2021
1
May, 2021
Available data
53
bam
51
bigWig
49
bed narrowPeak
27
fastq
21
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
tagAlign
1
bed bed3+
Organism
53
Homo sapiens
Biosample type
36
primary cell
10
in vitro differentiated cells
7
cell line
Organ
380
liver
97
pancreas
84
connective tissue
73
brain
54
vasculature
53
blood vessel
53
epithelium
51
blood
51
bodily fluid
49
heart
37
adipose tissue
34
limb
25
kidney
20
musculature of body
19
artery
16
nerve
10
spleen
9
vein
7
embryo
1
eye
Project
53
AMP
Genome assembly (visualization)
51
hg19
49
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
10
missing controlled_by
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
kidney epithelial cell
3
+ See 6 more…
in vitro differentiated cells
hepatocyte
9
pancreatic PP cell
1
cell line
EndoC_BH1
7
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