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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
246
ChIP-seq
Assay category
246
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
332
November, 2017
246
August, 2017
203
October, 2019
156
May, 2021
97
May, 2019
73
December, 2017
66
April, 2019
64
November, 2018
45
October, 2018
32
September, 2018
31
August, 2021
28
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
11
November, 2019
5
February, 2021
3
March, 2020
Available data
170
bigWig
150
bam
150
fastq
132
bed narrowPeak
74
tagAlign
39
bed broadPeak
32
bigBed narrowPeak
31
bed bed3+
13
bigBed broadPeak
Organism
240
Homo sapiens
Biosample type
147
tissue
59
in vitro differentiated cells
40
primary cell
Organ
103
connective tissue
73
pancreas
44
adipose tissue
37
liver
19
musculature of body
14
epithelium
Project
246
AMP
Genome assembly (visualization)
170
hg19
149
GRCh38
Lab
246
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
246 results
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Clear Filters
ChIP-seq
tissue
liver
37
islet of Langerhans
35
subcutaneous abdominal adipose tissue
31
skeletal muscle tissue
19
pancreas
12
+ See 2 more…
in vitro differentiated cells
adipocyte
59
primary cell
skeletal muscle myoblast
14
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
See all biosamples
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