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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
418
ChIP-seq
Assay category
418
DNA binding
Target of assay
628
histone modification
627
histone
324
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
73
August, 2017
37
May, 2019
33
December, 2017
29
April, 2019
28
November, 2017
27
May, 2020
26
October, 2018
20
May, 2024
7
November, 2018
3
December, 2018
2
January, 2019
2
March, 2020
2
October, 2017
Available data
361
bigWig
341
bed narrowPeak
332
bam
173
bigBed narrowPeak
110
tagAlign
107
fastq
19
bed bed3+
15
bed broadPeak
1
tagAlign bed3+
Organism
416
Homo sapiens
Biosample type
418
tissue
380
cell line
125
primary cell
104
in vitro differentiated cells
1
stem cell
Organ
114
brain
83
liver
50
heart
49
pancreas
30
connective tissue
29
adipose tissue
21
blood vessel
21
vasculature
15
limb
11
kidney
9
musculature of body
8
nerve
8
spleen
7
artery
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
416
AMP
2
T1D
Genome assembly (visualization)
344
GRCh38
327
hg19
Lab
398
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
418 results
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Clear Filters
ChIP-seq
tissue
liver
79
islet of Langerhans
44
left cardiac atrium
20
body of pancreas
15
heart left ventricle
14
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